Sequence Similarity Clusters for the Entities in PDB 1NB7

Entity #1 | Chains: E,F
5'-R(*UP*UP*UP*U)-3' rna, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
polyprotein protein, length: 570 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 36 36 469
95 % 163 166 71 Flexibility: Low
Max RMSD: 5.2, Avg RMSD: 0.7
PDBFlex
90 % 163 166 74
70 % 201 204 75
50 % 201 204 100
40 % 201 204 123
30 % 201 204 135

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.