Sequence Similarity Clusters for the Entities in PDB 1NB5

Entity #1 | Chains: A,B,C,D
Cathepsin H protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 7122
95 % 2 3 7688
90 % 2 3 7646
70 % 2 3 7427
50 % 2 3 6842
40 % 182 212 132
30 % 212 248 124
Entity #2 | Chains: P,R,S,T
Cathepsin H MINI CHAIN protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: I,J,K,L
STEFIN A protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 8 2628
95 % 4 12 2662
90 % 4 12 2709
70 % 4 12 2689
50 % 7 15 1584
40 % 7 15 1605
30 % 7 15 1578

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.