Sequence Similarity Clusters for the Entities in PDB 1NB5

Entity #1 | Chains: A,B,C,D
Cathepsin H protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 3 6527
95 % 2 3 7064
90 % 2 3 7041
70 % 2 3 6843
50 % 2 3 6342
40 % 177 206 127
30 % 203 236 123
Entity #2 | Chains: P,R,S,T
Cathepsin H MINI CHAIN protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: I,J,K,L
STEFIN A protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 8 2421
95 % 4 12 2448
90 % 4 12 2496
70 % 4 12 2479
50 % 7 15 1476
40 % 7 15 1504
30 % 7 15 1472

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.