Sequence Similarity Clusters for the Entities in PDB 1NB3

Entity #1 | Chains: A,B,C,D
Cathepsin H protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6734
95 % 3 3 7262
90 % 3 3 7227
70 % 3 3 7019
50 % 3 3 6497
40 % 199 212 130
30 % 228 242 126
Entity #2 | Chains: P,R,S,T
CATHEPSIN H MINI CHAIN protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: I,J,K,L
Stefin A protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 2503
95 % 5 12 2542
90 % 5 12 2592
70 % 5 12 2566
50 % 8 15 1521
40 % 8 15 1548
30 % 8 15 1520

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.