Sequence Similarity Clusters for the Entities in PDB 1NB3

Entity #1 | Chains: A,B,C,D
Cathepsin H protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6665
95 % 3 3 7194
90 % 3 3 7164
70 % 3 3 6964
50 % 3 3 6446
40 % 198 211 128
30 % 227 241 124
Entity #2 | Chains: P,R,S,T
CATHEPSIN H MINI CHAIN protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: I,J,K,L
Stefin A protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 2477
95 % 5 12 2518
90 % 5 12 2566
70 % 5 12 2544
50 % 8 15 1506
40 % 8 15 1534
30 % 8 15 1507

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.