Sequence Similarity Clusters for the Entities in PDB 1NB3

Entity #1 | Chains: A,B,C,D
Cathepsin H protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6615
95 % 3 3 7152
90 % 3 3 7124
70 % 3 3 6924
50 % 3 3 6411
40 % 197 210 126
30 % 226 240 125
Entity #2 | Chains: P,R,S,T
CATHEPSIN H MINI CHAIN protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: I,J,K,L
Stefin A protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 8 2454
95 % 5 12 2490
90 % 5 12 2541
70 % 5 12 2518
50 % 8 15 1493
40 % 8 15 1522
30 % 8 15 1492

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.