Sequence Similarity Clusters for the Entities in PDB 1NAX

Entity #1 | Chains: A
Thyroid hormone receptor beta-1 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 15 3324
95 % 10 18 2889 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 10 18 2948
70 % 17 27 1943
50 % 17 27 1973
40 % 17 27 1953
30 % 983 1254 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures