Sequence Similarity Clusters for the Entities in PDB 1NAX

Entity #1 | Chains: A
Thyroid hormone receptor beta-1 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 4236
95 % 10 18 2766 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 10 18 2812
70 % 17 27 1830
50 % 17 27 1856
40 % 17 27 1864
30 % 782 983 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.