Sequence Similarity Clusters for the Entities in PDB 1NAX

Entity #1 | Chains: A
Thyroid hormone receptor beta-1 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 15 3508
95 % 10 18 3015 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 10 18 3077
70 % 17 27 2047
50 % 17 27 2074
40 % 17 27 2054
30 % 1019 1305 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures