Sequence Similarity Clusters for the Entities in PDB 1NAX

Entity #1 | Chains: A
Thyroid hormone receptor beta-1 protein, length: 252 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 15 3402
95 % 10 18 2957 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 10 18 3020
70 % 17 27 1991
50 % 17 27 2025
40 % 17 27 2001
30 % 999 1278 8

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures