Sequence Similarity Clusters for the Entities in PDB 1NAV

Entity #1 | Chains: A
hormone receptor alpha 1, THRA1 protein, length: 263 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 12513
95 % 8 8 9074 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 1.9
PDBFlex
90 % 8 9 7694
70 % 19 27 1860
50 % 19 27 1893
40 % 19 27 1898
30 % 848 992 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures