Sequence Similarity Clusters for the Entities in PDB 1NAQ

Entity #1 | Chains: A,B,C,D,E,F
Periplasmic divalent cation tolerance protein cutA protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 4222
95 % 3 7 1756 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.7
PDBFlex
90 % 3 8 1605
70 % 3 9 1197
50 % 3 9 1246
40 % 3 10 1171
30 % 7 23 616

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures