Sequence Similarity Clusters for the Entities in PDB 1NAN

Entity #1 | Chains: H,L
H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 49 367
95 % 41 65 343
90 % 43 70 349
70 % 444 662 7
50 % 445 667 7
40 % 476 715 11
30 % 512 832 15
Entity #2 | Chains: I,P
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 75 131 95
95 % 106 213 66
90 % 106 213 70
70 % 545 857 5
50 % 555 877 5
40 % 555 877 9
30 % 555 877 14
Entity #3 | Chains: M,Q
pBM1 peptide protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.