Sequence Similarity Clusters for the Entities in PDB 1NAN

Entity #1 | Chains: H,L
H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 278 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 29 49 303
95 % 41 65 328
90 % 43 70 329
70 % 427 638 7
50 % 428 643 7
40 % 454 685 11
30 % 490 801 14
Entity #2 | Chains: I,P
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 75 131 91
95 % 105 212 65
90 % 105 212 69
70 % 525 831 5
50 % 535 851 5
40 % 535 851 9
30 % 535 851 12
Entity #3 | Chains: M,Q
pBM1 peptide protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.