Sequence Similarity Clusters for the Entities in PDB 1NA8

Entity #1 | Chains: A,B
ADP-ribosylation factor binding protein GGA1 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44749
95 % 1 2 19864 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 1 2 19328
70 % 2 3 13779
50 % 2 3 12242
40 % 2 3 11098
30 % 3 4 8560

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures