Sequence Similarity Clusters for the Entities in PDB 1N9A

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 10221
95 % 10 10 6812 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 10 10 6797
70 % 10 10 6640
50 % 10 10 6166
40 % 10 10 5768
30 % 25 25 2231
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 41 41 943
95 % 56 56 895 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 56 56 932
70 % 56 56 964
50 % 56 56 1012
40 % 56 56 1033
30 % 56 56 1012

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.