Sequence Similarity Clusters for the Entities in PDB 1N95

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10457
95 % 6 10 6959 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 6 10 6944
70 % 6 10 6774
50 % 6 10 6289
40 % 6 10 5882
30 % 21 25 2289
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 402 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 37 41 966
95 % 51 56 924 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 51 56 956
70 % 51 56 986
50 % 51 56 1036
40 % 51 56 1051
30 % 51 56 1034

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures