Sequence Similarity Clusters for the Entities in PDB 1N94

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 25573
95 % 9 10 6596 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 9 10 6583
70 % 9 10 6416
50 % 9 10 5973
40 % 9 10 5583
30 % 24 25 2168
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 40 41 908
95 % 55 56 873
90 % 55 56 908
70 % 55 56 940
50 % 55 56 984
40 % 55 56 1001
30 % 55 56 979

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.