Sequence Similarity Clusters for the Entities in PDB 1N94

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26399
95 % 9 10 6806 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 9 10 6790
70 % 9 10 6633
50 % 9 10 6159
40 % 9 10 5759
30 % 24 25 2228
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 41 941
95 % 55 56 892 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 55 56 929
70 % 55 56 963
50 % 55 56 1012
40 % 55 56 1032
30 % 55 56 1011

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.