Sequence Similarity Clusters for the Entities in PDB 1N94

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 315 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26812
95 % 9 10 6908 Flexibility: Low
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 9 10 6894
70 % 9 10 6728
50 % 9 10 6249
40 % 9 10 5844
30 % 24 25 2266
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 41 956
95 % 55 56 916 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 55 56 950
70 % 55 56 980
50 % 55 56 1030
40 % 55 56 1046
30 % 55 56 1025

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures