Sequence Similarity Clusters for the Entities in PDB 1N8S

Entity #1 | Chains: A
Triacylglycerol lipase, pancreatic protein, length: 449 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 26488
95 % 3 3 22416 Flexibility: Low
Max RMSD: 4.2, Avg RMSD: 2.9
PDBFlex
90 % 3 3 21757
70 % 10 10 4723
50 % 12 12 3926
40 % 12 12 3766
30 % 12 12 3519
Entity #2 | Chains: C
colipase II protein, length: 95 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 48988
95 % 4 6 11225 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.3
PDBFlex
90 % 4 6 11081
70 % 4 6 10504
50 % 4 6 9499
40 % 4 6 8681
30 % 4 6 7638

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures