Sequence Similarity Clusters for the Entities in PDB 1N8O

Entity #1 | Chains: A
Chymotrypsin A, A chain protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: B
Chymotrypsin A, b chain protein, length: 131 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 38 813
95 % 23 38 1109 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 23 38 1130
70 % 23 40 1127
50 % 23 40 1167
40 % 24 42 1133
30 % 25 50 972
Entity #3 | Chains: C
Chymotrypsin A, C chain protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 38 814
95 % 23 38 1110 Flexibility: No
Max RMSD: 1.5, Avg RMSD: 0.4
PDBFlex
90 % 23 38 1132
70 % 23 40 1130
50 % 25 43 1098
40 % 26 52 970
30 % 26 52 946
Entity #4 | Chains: E
ecotin protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 9309
95 % 3 18 1949 Flexibility: Low
Max RMSD: 9.8, Avg RMSD: 1.7
PDBFlex
90 % 3 18 1998
70 % 3 19 1680
50 % 3 19 1722
40 % 3 19 1734
30 % 3 19 1684

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.