Sequence Similarity Clusters for the Entities in PDB 1N8E

Entity #1 | Chains: A,D
Fibrin alpha/alpha-E chain protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 17 969
95 % 16 17 1332
90 % 16 17 1357
70 % 16 17 1375
50 % 16 17 1425
40 % 16 17 1438
30 % 16 17 1413
Entity #2 | Chains: B,E
Fibrin beta chain protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 24 25 656
95 % 27 28 794
90 % 27 28 821
70 % 27 28 859
50 % 29 30 814
40 % 29 30 850
30 % 58 61 391
Entity #3 | Chains: C,F
Fibrin gamma chain protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 23 706
95 % 28 29 755
90 % 28 29 787
70 % 28 29 827
50 % 30 31 785
40 % 30 31 822
30 % 59 61 391

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.