Sequence Similarity Clusters for the Entities in PDB 1N8B

Entity #1 | Chains: A,B,C,D
baseplate structural protein gp8 protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 8 718
95 % 3 8 981 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 3 8 1011
70 % 3 8 1055
50 % 3 8 1096
40 % 3 8 1110
30 % 3 8 1092

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.