Sequence Similarity Clusters for the Entities in PDB 1N86

Entity #1 | Chains: A,D
Fibrin alpha/alpha-E chain protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 17 905
95 % 11 17 1242
90 % 11 17 1268
70 % 11 17 1303
50 % 11 17 1347
40 % 11 17 1363
30 % 11 17 1335
Entity #2 | Chains: B,E
Fibrin beta chain protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 25 590
95 % 22 28 703
90 % 22 28 734
70 % 22 28 781
50 % 24 30 736
40 % 24 30 774
30 % 47 61 345
Entity #3 | Chains: C,F
Fibrin gamma chain protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 23 635
95 % 22 29 673
90 % 22 29 702
70 % 22 29 748
50 % 24 31 707
40 % 24 31 749
30 % 48 61 345
Entity #4 | Chains: G,H
fibrin alpha chain peptide ligand fragment Gly-Pro-Arg protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: I,J
fibrin beta chain peptide ligand fragment Gly-His-Arg-Pro-Leu-Asp-Lys protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.