Sequence Similarity Clusters for the Entities in PDB 1N86

Entity #1 | Chains: A,D
Fibrin alpha/alpha-E chain protein, length: 87 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 11 17 894
95 % 11 17 1228
90 % 11 17 1253
70 % 11 17 1285
50 % 11 17 1331
40 % 11 17 1345
30 % 11 17 1322
Entity #2 | Chains: B,E
Fibrin beta chain protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 19 25 583
95 % 22 28 691
90 % 22 28 722
70 % 22 28 766
50 % 24 30 725
40 % 24 30 763
30 % 47 61 341
Entity #3 | Chains: C,F
Fibrin gamma chain protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 23 625
95 % 22 29 660
90 % 22 29 691
70 % 22 29 732
50 % 24 31 697
40 % 24 31 738
30 % 48 61 341
Entity #4 | Chains: G,H
fibrin alpha chain peptide ligand fragment Gly-Pro-Arg protein, length: 3 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #5 | Chains: I,J
fibrin beta chain peptide ligand fragment Gly-His-Arg-Pro-Leu-Asp-Lys protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.