Sequence Similarity Clusters for the Entities in PDB 1N80

Entity #1 | Chains: A,B,C,D
baseplate structural protein gp8 protein, length: 334 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 8 826
95 % 2 8 1014 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.9
PDBFlex
90 % 2 8 1049
70 % 2 8 1094
50 % 2 8 1145
40 % 2 8 1151
30 % 2 8 1147

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures