Sequence Similarity Clusters for the Entities in PDB 1N7S

Entity #1 | Chains: A
vesicle-associated membrane protein 2 protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 12 3524
95 % 1 12 4294
90 % 1 12 4312
70 % 1 12 4235
50 % 1 12 4093
40 % 1 12 3917
30 % 2 14 2871
Entity #2 | Chains: B
Syntaxin 1A protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 18 1161
95 % 1 18 1576
90 % 1 18 1610
70 % 1 18 1649
50 % 1 19 1542
40 % 1 19 1566
30 % 1 21 1404
Entity #3 | Chains: C
SNAP-25A protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 15 1358
95 % 1 15 1831
90 % 1 16 1705
70 % 1 16 1742
50 % 1 17 1699
40 % 1 17 1717
30 % 1 17 1658
Entity #4 | Chains: D
SNAP-25A protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 13 1646
95 % 1 14 2096
90 % 1 14 2152
70 % 1 14 2160
50 % 1 14 2137
40 % 1 14 2136
30 % 1 15 1971

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.