Sequence Similarity Clusters for the Entities in PDB 1N7S

Entity #1 | Chains: A
vesicle-associated membrane protein 2 protein, length: 63 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 12 3663
95 % 1 12 4446
90 % 1 12 4467
70 % 1 12 4396
50 % 1 12 4234
40 % 1 12 4038
30 % 2 14 2951
Entity #2 | Chains: B
Syntaxin 1A protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 20 1142
95 % 1 20 1553
90 % 1 20 1580
70 % 1 20 1597
50 % 1 21 1486
40 % 1 21 1505
30 % 1 23 1369
Entity #3 | Chains: C
SNAP-25A protein, length: 79 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 17 1291
95 % 1 17 1743
90 % 1 18 1645
70 % 1 18 1662
50 % 1 19 1633
40 % 1 19 1652
30 % 1 19 1619
Entity #4 | Chains: D
SNAP-25A protein, length: 66 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 15 1586
95 % 1 16 1973
90 % 1 16 2021
70 % 1 17 1708
50 % 1 19 1523
40 % 1 21 1325
30 % 1 22 1279

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.