Sequence Similarity Clusters for the Entities in PDB 1N7F

Entity #1 | Chains: A,B
AMPA receptor interacting protein GRIP protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 26998
95 % 2 2 22355
90 % 2 2 21659
70 % 2 2 19836
50 % 2 2 17245
40 % 2 2 15371
30 % 100 289 107
Entity #2 | Chains: C,D
8-mer peptide from interacting protein (liprin) protein, length: 8 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.