Sequence Similarity Clusters for the Entities in PDB 1N77

Entity #1 | Chains: C,D
tRNA(Glu) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
Glutamyl-tRNA synthetase protein, length: 468 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 9 3573
95 % 8 11 3440 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 8 11 3492
70 % 8 11 3454
50 % 8 11 3356
40 % 12 19 1588
30 % 16 24 1268

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures