Sequence Similarity Clusters for the Entities in PDB 1N6N

Entity #1 | Chains: A
Ras-related protein Rab-5A protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 8 9942
95 % 8 13 3041 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.7
PDBFlex
90 % 8 18 1927
70 % 8 18 1886
50 % 10 27 1350
40 % 96 494 25
30 % 113 845 14

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures