Sequence Similarity Clusters for the Entities in PDB 1N6L

Entity #1 | Chains: A
Ras-related protein Rab-5A protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 28556
95 % 7 13 2863 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.8
PDBFlex
90 % 7 18 1792
70 % 7 18 1817
50 % 9 26 1309
40 % 91 462 21
30 % 107 797 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures