Sequence Similarity Clusters for the Entities in PDB 1N6K

Entity #1 | Chains: A
Ras-related protein Rab-5A protein, length: 170 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 29063
95 % 3 13 2913 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 1.8
PDBFlex
90 % 3 18 1832
70 % 3 18 1857
50 % 5 26 1331
40 % 72 478 21
30 % 88 817 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures