Sequence Similarity Clusters for the Entities in PDB 1N6E

Entity #1 | Chains: A,C,E,G,I,K
tricorn protease protein, length: 1071 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 2222
95 % 2 4 2524 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 2 4 2598
70 % 2 4 2581
50 % 2 4 2575
40 % 2 4 2527
30 % 2 4 2370
Entity #2 | Chains: B,D,F,H,J,L
DQTQKAAAELTFF protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures