Sequence Similarity Clusters for the Entities in PDB 1N6D

Entity #1 | Chains: A,B,C,D,E,F
tricorn protease protein, length: 1071 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 1764
95 % 4 4 2325 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 4 4 2389
70 % 4 4 2377
50 % 4 4 2368
40 % 4 4 2346
30 % 4 4 2249
Entity #2 | Chains: G,H,I,J,K,L
RVRK protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.