Sequence Similarity Clusters for the Entities in PDB 1N64

Entity #1 | Chains: L
Fab 19D9D6 light chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 4028
95 % 47 62 429 Flexibility: Low
Max RMSD: 5.5, Avg RMSD: 1.7
PDBFlex
90 % 60 83 311
70 % 1473 2362 1
50 % 2990 4781 1
40 % 2990 4781 1
30 % 3468 5635 1
Entity #2 | Chains: H
Fab 19D9D6 heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 4036
95 % 4 7 4813 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 6 9 3825
70 % 1442 2311 2
50 % 2991 4781 1
40 % 2991 4781 1
30 % 3469 5635 1
Entity #3 | Chains: P
Genome polyprotein Capsid protein C protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures