Sequence Similarity Clusters for the Entities in PDB 1N64

Entity #1 | Chains: L
Fab 19D9D6 light chain protein, length: 220 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 3791
95 % 47 62 371 Flexibility: Low
Max RMSD: 5.6, Avg RMSD: 1.8
PDBFlex
90 % 60 83 290
70 % 1149 1822 2
50 % 2815 4489 1
40 % 2815 4489 1
30 % 3263 5290 1
Entity #2 | Chains: H
Fab 19D9D6 heavy chain protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 7 3798
95 % 4 7 4558 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 1.2
PDBFlex
90 % 6 9 3658
70 % 1361 2172 1
50 % 2816 4489 1
40 % 2816 4489 1
30 % 3264 5290 1
Entity #3 | Chains: P
Genome polyprotein Capsid protein C protein, length: 16 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.