Sequence Similarity Clusters for the Entities in PDB 1N63

Entity #1 | Chains: A,D
Carbon monoxide dehydrogenase small chain protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 5298
95 % 3 6 5981 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 3 6 5981
70 % 3 6 5835
50 % 3 9 3685
40 % 3 13 2379
30 % 3 13 2272
Entity #2 | Chains: B,E
Carbon monoxide dehydrogenase large chain protein, length: 809 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 5947
95 % 3 6 5290 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.9
PDBFlex
90 % 3 6 5316
70 % 3 6 5232
50 % 3 8 3752
40 % 3 8 3611
30 % 3 12 2442
Entity #3 | Chains: C,F
Carbon monoxide dehydrogenase medium chain protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 6309
95 % 3 6 5676 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 3 6 5692
70 % 3 6 5591
50 % 3 8 3925
40 % 3 9 3504
30 % 3 10 2945

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1N62 2 B, E Carbon monoxide dehydrogenase large chain 40137 1.2.7.4 | Details
2 1N60 2 B, E Carbon monoxide dehydrogenase large chain 40137 1.2.7.4 | Details
3 1N63 2 B, E Carbon monoxide dehydrogenase large chain 40137 1.2.7.4 | Details
4 1N61 2 B, E Carbon monoxide dehydrogenase large chain 40137 1.2.7.4 | Details
5 1N5W 2 B, E Carbon monoxide dehydrogenase large chain 40137 1.2.7.4 | Details
6 1ZXI 2 B, E Carbon monoxide dehydrogenase large chain 40137 1.2.7.4 | Details
7 1FFV 2 B, E CUTL, MOLYBDOPROTEIN OF CARBON MONOXIDE DEHYDROGENASE 47421 1.2.7.4 | Details
8 1FFU 2 B, E CUTL, MOLYBDOPROTEIN OF CARBON MONOXIDE DEHYDROGENASE 47421 1.2.7.4 | Details