Sequence Similarity Clusters for the Entities in PDB 1N62

Entity #1 | Chains: A,D
Carbon monoxide dehydrogenase small chain protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 4934
95 % 1 6 5597
90 % 1 6 5597
70 % 1 6 5474
50 % 1 9 3504
40 % 1 13 2254
30 % 1 13 2152
Entity #2 | Chains: B,E
Carbon monoxide dehydrogenase large chain protein, length: 809 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 5571
95 % 1 6 4948
90 % 1 6 4968
70 % 1 6 4900
50 % 1 8 3562
40 % 1 8 3438
30 % 1 12 2312
Entity #3 | Chains: C,F
Carbon monoxide dehydrogenase medium chain protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 5 5905
95 % 1 6 5316
90 % 1 6 5330
70 % 1 6 5244
50 % 1 8 3728
40 % 1 9 3338
30 % 1 10 2796

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.