Sequence Similarity Clusters for the Entities in PDB 1N61

Entity #1 | Chains: A,D
Carbon monoxide dehydrogenase small chain protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 4899
95 % 4 6 5552
90 % 4 6 5554
70 % 4 6 5435
50 % 4 9 3476
40 % 4 13 2235
30 % 4 13 2135
Entity #2 | Chains: B,E
Carbon monoxide dehydrogenase large chain protein, length: 809 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 5522
95 % 4 6 4913
90 % 4 6 4934
70 % 4 6 4867
50 % 4 8 3536
40 % 4 8 3413
30 % 4 12 2288
Entity #3 | Chains: C,F
Carbon monoxide dehydrogenase medium chain protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 5851
95 % 4 6 5273
90 % 4 6 5288
70 % 4 6 5206
50 % 4 8 3704
40 % 4 9 3312
30 % 4 10 2781

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.