Sequence Similarity Clusters for the Entities in PDB 1N61

Entity #1 | Chains: A,D
Carbon monoxide dehydrogenase small chain protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 6 4969
95 % 4 6 5636
90 % 4 6 5634
70 % 4 6 5510
50 % 4 9 3526
40 % 4 13 2265
30 % 4 13 2168
Entity #2 | Chains: B,E
Carbon monoxide dehydrogenase large chain protein, length: 809 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 5610
95 % 4 6 4977
90 % 4 6 4995
70 % 4 6 4927
50 % 4 8 3584
40 % 4 8 3461
30 % 4 12 2330
Entity #3 | Chains: C,F
Carbon monoxide dehydrogenase medium chain protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 4 5 5950
95 % 4 6 5350
90 % 4 6 5362
70 % 4 6 5274
50 % 4 8 3752
40 % 4 9 3360
30 % 4 10 2813

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.