Sequence Similarity Clusters for the Entities in PDB 1N5W

Entity #1 | Chains: A,D
Carbon monoxide dehydrogenase small chain protein, length: 166 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 4827
95 % 5 6 5481
90 % 5 6 5486
70 % 5 6 5374
50 % 5 9 3445
40 % 5 13 2208
30 % 5 13 2111
Entity #2 | Chains: B,E
Carbon monoxide dehydrogenase large chain protein, length: 809 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 5429
95 % 5 6 4845
90 % 5 6 4866
70 % 5 6 4803
50 % 5 8 3501
40 % 5 8 3386
30 % 5 12 2266
Entity #3 | Chains: C,F
Carbon monoxide dehydrogenase medium chain protein, length: 288 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 5 5766
95 % 5 6 5197
90 % 5 6 5213
70 % 5 6 5136
50 % 5 8 3676
40 % 5 9 3290
30 % 5 10 2757

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.