Sequence Similarity Clusters for the Entities in PDB 1N59

Entity #1 | Chains: A,C
H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 49 356
95 % 60 65 341
90 % 64 70 345
70 % 619 656 7
50 % 621 661 7
40 % 662 709 11
30 % 756 826 14
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 120 131 93
95 % 189 212 65
90 % 189 212 70
70 % 788 856 5
50 % 802 876 4
40 % 802 876 9
30 % 802 876 13
Entity #3 | Chains: P,Q
nonameric peptide, gp33 derived from lymphocytic choriomeningitis virus protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.