Sequence Similarity Clusters for the Entities in PDB 1N59

Entity #1 | Chains: A,C
H-2 class I histocompatibility antigen, K-B alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 44 49 403
95 % 60 65 358
90 % 64 70 361
70 % 654 692 6
50 % 656 697 6
40 % 700 748 10
30 % 797 868 15
Entity #2 | Chains: B,D
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 122 133 95
95 % 194 217 64
90 % 194 217 68
70 % 817 885 4
50 % 833 907 3
40 % 833 907 9
30 % 833 907 14
Entity #3 | Chains: P,Q
nonameric peptide, gp33 derived from lymphocytic choriomeningitis virus protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.