Sequence Similarity Clusters for the Entities in PDB 1N54

Entity #1 | Chains: A
80 kDa nuclear cap binding protein protein, length: 790 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 16256
95 % 5 6 8084 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 5 6 8042
70 % 5 6 7782
50 % 5 6 7162
40 % 5 6 6656
30 % 5 6 5941
Entity #2 | Chains: B
20 kDa nuclear cap binding protein protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 9326
95 % 6 7 9501 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 0.9
PDBFlex
90 % 6 7 9399
70 % 6 7 8993
50 % 6 7 8119
40 % 6 7 7447
30 % 6 7 6576

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.