Sequence Similarity Clusters for the Entities in PDB 1N4X

Entity #1 | Chains: L,M
immunoglobulin kappa chain variable region protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 45073
95 % 1 1 33778 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 3 13 3282
70 % 3 20 1814
50 % 65 301 22
40 % 190 884 5
30 % 212 1010 7
Entity #2 | Chains: H,I
immunoglobulin heavy chain variable region protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44717
95 % 1 1 33501 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 32047
70 % 1 4 11757
50 % 118 538 8
40 % 191 884 5
30 % 213 1010 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.