Sequence Similarity Clusters for the Entities in PDB 1N4M

Entity #1 | Chains: A,B
Retinoblastoma Pocket protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 34207
95 % 2 4 9999 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.1
PDBFlex
90 % 2 4 9890
70 % 2 4 9389
50 % 2 4 8523
40 % 2 4 7814
30 % 3 7 5011
Entity #2 | Chains: C,D,E
Transcription factor E2F2 protein, length: 18 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.