Sequence Similarity Clusters for the Entities in PDB 1N4J

Entity #1 | Chains: A
Streptavidin protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 15887
95 % 136 144 72 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 139 147 72
70 % 139 147 87
50 % 140 148 115
40 % 140 148 138
30 % 178 202 98

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures