Sequence Similarity Clusters for the Entities in PDB 1N4J

Entity #1 | Chains: A
Streptavidin protein, length: 127 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 116 122 98
95 % 136 144 77 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 139 147 77
70 % 139 147 96
50 % 140 148 126
40 % 170 194 101
30 % 179 203 109

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures