Sequence Similarity Clusters for the Entities in PDB 1N3N

Entity #1 | Chains: A,C,E,G
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 54 55 207
95 % 58 59 269
90 % 60 61 276
70 % 671 692 6
50 % 673 697 6
40 % 719 748 10
30 % 825 868 15
Entity #2 | Chains: B,D,F,H
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 130 133 95
95 % 206 217 64
90 % 206 217 68
70 % 844 885 4
50 % 862 907 3
40 % 862 907 9
30 % 862 907 14
Entity #3 | Chains: I,J,K,L
mycobacterial hsp60 decameric epitope protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.