Sequence Similarity Clusters for the Entities in PDB 1N3N

Entity #1 | Chains: A,C,E,G
H-2 CLASS I HISTOCOMPATIBILITY ANTIGEN, D-B ALPHA CHAIN protein, length: 280 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 45 46 241
95 % 49 50 325
90 % 51 52 339
70 % 629 649 7
50 % 631 654 7
40 % 673 701 11
30 % 776 817 14
Entity #2 | Chains: B,D,F,H
BETA-2-MICROGLOBULIN protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 128 131 92
95 % 201 212 65
90 % 201 212 69
70 % 807 847 5
50 % 823 867 4
40 % 823 867 9
30 % 823 867 13
Entity #3 | Chains: I,J,K,L
mycobacterial hsp60 decameric epitope protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.