Sequence Similarity Clusters for the Entities in PDB 1N39

Entity #1 | Chains: B
DNA complement strand dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
DNA inhibitor strand dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
N-glycosylase/DNA lyase protein, length: 317 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 26043
95 % 14 28 2018
90 % 14 28 2067
70 % 14 28 2073
50 % 14 28 2063
40 % 14 28 2066
30 % 14 28 1995

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.