Sequence Similarity Clusters for the Entities in PDB 1N35

Entity #1 | Chains: B
5'-R(P*GP*GP*GP*GP*G)-3' rna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
5'-R(*AP*UP*UP*AP*GP*CP*CP*CP*CP*C)-3' rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
Minor core protein lambda 3 protein, length: 1267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 6 10994
95 % 1 7 10096 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 7 9973
70 % 1 7 9467
50 % 1 7 8572
40 % 1 7 7860
30 % 1 7 6944

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures