Sequence Similarity Clusters for the Entities in PDB 1N35

Entity #1 | Chains: B
5'-R(P*GP*GP*GP*GP*G)-3' rna, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: C
5'-R(*AP*UP*UP*AP*GP*CP*CP*CP*CP*C)-3' rna, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: A
Minor core protein lambda 3 protein, length: 1267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 6 10000
95 % 1 7 9192
90 % 1 7 9088
70 % 1 7 8641
50 % 1 7 7851
40 % 1 7 7225
30 % 1 7 6397

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.