Sequence Similarity Clusters for the Entities in PDB 1N2R

Entity #1 | Chains: A
HLA class I histocompatibility antigen, BW-44(B-12) B*4403 alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 12458
95 % 8 22 2337
90 % 77 201 135
70 % 160 719 6
50 % 160 724 6
40 % 165 775 10
30 % 177 899 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 156 618 2
95 % 176 662 3
90 % 177 671 4
70 % 196 916 4
50 % 201 938 3
40 % 201 938 7
30 % 201 938 12
Entity #3 | Chains: C
HLA DPA*0201 PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures