Sequence Similarity Clusters for the Entities in PDB 1N2R

Entity #1 | Chains: A
HLA class I histocompatibility antigen, BW-44(B-12) B*4403 alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 6 12268
95 % 8 22 2299 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.6
PDBFlex
90 % 76 200 132
70 % 155 699 6
50 % 155 704 6
40 % 160 755 10
30 % 170 875 15
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 150 604 2
95 % 170 648 3
90 % 171 657 4
70 % 189 892 4
50 % 194 914 4
40 % 194 914 8
30 % 194 914 12
Entity #3 | Chains: C
HLA DPA*0201 PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.