Sequence Similarity Clusters for the Entities in PDB 1N2R

Entity #1 | Chains: A
HLA class I histocompatibility antigen, BW-44(B-12) B*4403 alpha chain protein, length: 276 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 6 12958
95 % 8 22 2451
90 % 79 204 137
70 % 167 740 6
50 % 171 754 7
40 % 172 806 9
30 % 184 930 12
Entity #2 | Chains: B
Beta-2-microglobulin protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 172 666 2
95 % 179 681 2
90 % 180 690 4
70 % 202 944 4
50 % 207 966 3
40 % 207 966 6
30 % 207 966 9
Entity #3 | Chains: C
HLA DPA*0201 PEPTIDE protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures