Sequence Similarity Clusters for the Entities in PDB 1N2D

Entity #1 | Chains: A,B
Myosin Light Chain protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 22494
95 % 2 3 19411 Flexibility: Medium
Max RMSD: 13.1, Avg RMSD: 7.9
PDBFlex
90 % 2 3 18896
70 % 2 3 17445
50 % 2 3 15161
40 % 70 339 39
30 % 74 366 49
Entity #2 | Chains: C
IQ2 AND IQ3 MOTIFS FROM MYO2P, A CLASS V MYOSIN protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 72840
95 % 1 1 50664
90 % 1 1 48103
70 % 1 1 42236
50 % 1 1 36033
40 % 1 1 31723
30 % 1 1 26820

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.