Sequence Similarity Clusters for the Entities in PDB 1N2D

Entity #1 | Chains: A,B
Myosin Light Chain protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 21777
95 % 2 3 18784 Flexibility: Medium
Max RMSD: 13.1, Avg RMSD: 7.9
PDBFlex
90 % 2 3 18293
70 % 2 3 16941
50 % 2 3 14754
40 % 68 335 32
30 % 72 362 47
Entity #2 | Chains: C
IQ2 AND IQ3 MOTIFS FROM MYO2P, A CLASS V MYOSIN protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70838
95 % 1 1 49196
90 % 1 1 46747
70 % 1 1 41170
50 % 1 1 35222
40 % 1 1 31029
30 % 1 1 26222

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.