Sequence Similarity Clusters for the Entities in PDB 1N2D

Entity #1 | Chains: A,B
Myosin Light Chain protein, length: 148 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 22098
95 % 2 3 19045 Flexibility: Medium
Max RMSD: 13.1, Avg RMSD: 9.2
PDBFlex
90 % 2 3 18542
70 % 2 3 17160
50 % 2 3 14928
40 % 69 336 34
30 % 73 363 47
Entity #2 | Chains: C
IQ2 AND IQ3 MOTIFS FROM MYO2P, A CLASS V MYOSIN protein, length: 48 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71687
95 % 1 1 49796
90 % 1 1 47291
70 % 1 1 41644
50 % 1 1 35616
40 % 1 1 31372
30 % 1 1 26522

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.