Sequence Similarity Clusters for the Entities in PDB 1N2C

Entity #1 | Chains: A,C
NITROGENASE MOLYBDENUM-IRON PROTEIN protein, length: 491 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 15 845
95 % 21 24 785 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 21 24 815
70 % 27 30 677
50 % 27 30 720
40 % 27 30 753
30 % 27 31 696
Entity #2 | Chains: B,D
NITROGENASE MOLYBDENUM-IRON PROTEIN protein, length: 522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 19 22 701
95 % 21 24 784 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 21 24 814
70 % 21 24 858
50 % 27 30 718
40 % 27 30 752
30 % 27 30 743
Entity #3 | Chains: E,F,G,H
NITROGENASE IRON PROTEIN protein, length: 289 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 12 716
95 % 16 21 614 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 16 21 645
70 % 16 21 689
50 % 17 22 702
40 % 17 22 740
30 % 17 22 732

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.