Sequence Similarity Clusters for the Entities in PDB 1N25

Entity #1 | Chains: A,B
Large T Antigen protein, length: 368 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 892
95 % 5 7 1199 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 5 7 1227
70 % 9 11 1159
50 % 9 11 1197
40 % 9 11 1213
30 % 9 11 1185

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5J47 1 A Large T antigen UNP residues 261-628 1891763 3.6.4 | Details
2 1SVM 1 A, B, C, D, E, F large T antigen HELICASE DOMAIN 1891767 3.6.4 | Details
3 5J40 1 A Large T antigen UNP residues 261-628 1891763 3.6.4 | Details
4 1SVL 1 A, B, C large T antigen HELICASE DOMAIN 1891767 3.6.4 | Details
5 2H1L 1 A, B, C, D, E, F, G, H, I, J, K, L Large T antigen Helicase Domain, residues 260-627 1891767 3.6.4 | Details
6 5J4Y 1 A Large T antigen UNP residues 261-628 1891763 3.6.4 | Details
7 5J4V 1 A Large T antigen UNP residues 261-628 1891763 3.6.4 | Details
8 1SVO 1 A, B large T antigen HELICASE DOMAIN 1891767 3.6.4 | Details
9 1N25 1 A, B Large T Antigen helicase domain 1891767 3.6.4 | Details
10 5TCT 1 A, B, C, D, E, F Large T antigen 1891767 3.6.4 | Details
11 4E2I 1 A, B, C, D, E, F, G, H, I, J, K, L Large T antigen UNP residues 266-627 1891767 3.6.4 | Details