Sequence Similarity Clusters for the Entities in PDB 1N25

Entity #1 | Chains: A,B
Large T Antigen protein, length: 368 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 1126
95 % 5 7 1337 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 5 7 1361
70 % 9 11 1281
50 % 9 11 1324
40 % 9 11 1306
30 % 9 11 1304

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5J47 1 A Large T antigen UNP residues 261-628 1891763 3.6.4 | Details
2 1SVM 1 A, B, C, D, E, F large T antigen HELICASE DOMAIN 1891767 3.6.4 | Details
3 5J40 1 A Large T antigen UNP residues 261-628 1891763 3.6.4 | Details
4 1SVL 1 A, B, C large T antigen HELICASE DOMAIN 1891767 3.6.4 | Details
5 2H1L 1 A, B, C, D, E, F, G, H, I, J, K, L Large T antigen Helicase Domain, residues 260-627 1891767 3.6.4 | Details
6 5J4Y 1 A Large T antigen UNP residues 261-628 1891763 3.6.4 | Details
7 5J4V 1 A Large T antigen UNP residues 261-628 1891763 3.6.4 | Details
8 1SVO 1 A, B large T antigen HELICASE DOMAIN 1891767 3.6.4 | Details
9 1N25 1 A, B Large T Antigen helicase domain 1891767 3.6.4 | Details
10 5TCT 1 A, B, C, D, E, F Large T antigen 1891767 3.6.4 | Details
11 4E2I 1 A, B, C, D, E, F, G, H, I, J, K, L Large T antigen UNP residues 266-627 1891767 3.6.4 | Details