Sequence Similarity Clusters for the Entities in PDB 1N25

Entity #1 | Chains: A,B
Large T Antigen protein, length: 368 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 913
95 % 5 7 1232 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 5 7 1261
70 % 9 11 1181
50 % 9 11 1226
40 % 9 11 1240
30 % 9 11 1212

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures