Sequence Similarity Clusters for the Entities in PDB 1N25

Entity #1 | Chains: A,B
Large T Antigen protein, length: 368 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 1119
95 % 5 7 1333 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 5 7 1354
70 % 9 11 1276
50 % 9 11 1316
40 % 9 11 1296
30 % 9 11 1298

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures