Sequence Similarity Clusters for the Entities in PDB 1N25

Entity #1 | Chains: A,B
Large T Antigen protein, length: 368 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 7 865
95 % 5 7 1173 Flexibility: Low
Max RMSD: 2.2, Avg RMSD: 1.1
PDBFlex
90 % 5 7 1201
70 % 9 11 1136
50 % 9 11 1179
40 % 9 11 1194
30 % 9 11 1167

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.