Sequence Similarity Clusters for the Entities in PDB 1N1L

Entity #1 | Chains: A,B
HCV NS3 SERINE PROTEASE protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38319
95 % 12 30 738
90 % 42 62 325
70 % 58 87 180
50 % 58 87 225
40 % 58 87 252
30 % 58 87 262
Entity #2 | Chains: C,D
NS4A COFACTOR protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 29 544
95 % 13 31 673
90 % 13 31 702
70 % 13 31 742
50 % 13 31 795
40 % 13 31 822
30 % 13 31 821

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.