Sequence Similarity Clusters for the Entities in PDB 1N1L

Entity #1 | Chains: A,B
HCV NS3 SERINE PROTEASE protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39679
95 % 12 30 808
90 % 42 62 345
70 % 58 87 191
50 % 58 87 238
40 % 58 87 263
30 % 58 87 272
Entity #2 | Chains: C,D
NS4A COFACTOR protein, length: 23 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 29 600
95 % 13 31 746
90 % 13 31 773
70 % 13 31 817
50 % 13 31 859
40 % 13 31 883
30 % 13 31 870

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.