Sequence Similarity Clusters for the Entities in PDB 1N1H

Entity #1 | Chains: B
5'-R(*AP*UP*UP*AP*GP*C)-3' rna, length: 6 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
Minor core protein lambda 3 protein, length: 1267 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 5 6 10172
95 % 5 7 9343
90 % 5 7 9244
70 % 5 7 8792
50 % 5 7 7988
40 % 5 7 7329
30 % 5 7 6488

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.