Sequence Similarity Clusters for the Entities in PDB 1N13

Entity #1 | Chains: A,C,E,G,I,K
Pyruvoyl-dependent arginine decarboxylase beta chain protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 2975
95 % 1 4 3257 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.8
PDBFlex
90 % 1 4 3303
70 % 1 4 3264
50 % 1 4 3175
40 % 1 4 3093
30 % 1 4 2899
Entity #2 | Chains: B,D,F,H,J,L
Pyruvoyl-dependent arginine decarboxylase alpha chain protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 4153
95 % 1 4 3243 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 4 3287
70 % 1 4 3250
50 % 1 4 3160
40 % 1 4 3076
30 % 1 4 2885

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures