Sequence Similarity Clusters for the Entities in PDB 1N13

Entity #1 | Chains: A,C,E,G,I,K
Pyruvoyl-dependent arginine decarboxylase beta chain protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 2995
95 % 1 4 3302 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.8
PDBFlex
90 % 1 4 3355
70 % 1 4 3299
50 % 1 4 3228
40 % 1 4 3121
30 % 1 4 2876
Entity #2 | Chains: B,D,F,H,J,L
Pyruvoyl-dependent arginine decarboxylase alpha chain protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 5925
95 % 1 4 3221 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 4 3204
70 % 1 4 3154
50 % 1 4 3109
40 % 1 4 3027
30 % 1 4 2794

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures