Sequence Similarity Clusters for the Entities in PDB 1N13

Entity #1 | Chains: A,C,E,G,I,K
Pyruvoyl-dependent arginine decarboxylase beta chain protein, length: 52 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 2872
95 % 1 4 3152 Flexibility: Low
Max RMSD: 5.1, Avg RMSD: 1.7
PDBFlex
90 % 1 4 3197
70 % 1 4 3165
50 % 1 4 3088
40 % 1 4 3014
30 % 1 4 2821
Entity #2 | Chains: B,D,F,H,J,L
Pyruvoyl-dependent arginine decarboxylase alpha chain protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 3987
95 % 1 4 3139 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 4 3183
70 % 1 4 3151
50 % 1 4 3075
40 % 1 4 2999
30 % 1 4 2809

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.