Sequence Similarity Clusters for the Entities in PDB 1N0W

Entity #1 | Chains: A
DNA repair protein RAD51 homolog 1 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 59778
95 % 1 1 42209
90 % 1 1 40277
70 % 1 1 35661
50 % 25 38 889
40 % 25 38 920
30 % 25 40 850
Entity #2 | Chains: B
Breast cancer type 2 susceptibility protein protein, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75446
95 % 1 1 52517
90 % 1 1 49785
70 % 1 1 43565
50 % 1 1 37144
40 % 1 1 32712
30 % 1 1 27704
Entity #3 | Chains: L
peptide linker protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: C
ARTIFICIAL GLY-SER-MSE-GLY PEPTIDE protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures