Sequence Similarity Clusters for the Entities in PDB 1N0W

Entity #1 | Chains: A
DNA repair protein RAD51 homolog 1 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55649
95 % 1 1 47768
90 % 1 1 45386
70 % 1 1 39849
50 % 25 38 920
40 % 25 38 941
30 % 25 40 873
Entity #2 | Chains: B
Breast cancer type 2 susceptibility protein protein, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 58392
95 % 1 1 47769
90 % 1 1 45387
70 % 1 1 39850
50 % 1 1 33809
40 % 1 1 29611
30 % 1 1 24720
Entity #3 | Chains: L
peptide linker protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: C
ARTIFICIAL GLY-SER-MSE-GLY PEPTIDE protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures