Sequence Similarity Clusters for the Entities in PDB 1N0W

Entity #1 | Chains: A
DNA repair protein RAD51 homolog 1 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 56646
95 % 1 1 40000
90 % 1 1 38248
70 % 1 1 33981
50 % 25 38 850
40 % 25 38 880
30 % 25 40 803
Entity #2 | Chains: B
Breast cancer type 2 susceptibility protein protein, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 71583
95 % 1 1 49843
90 % 1 1 47354
70 % 1 1 41618
50 % 1 1 35598
40 % 1 1 31388
30 % 1 1 26579
Entity #3 | Chains: L
peptide linker protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: C
ARTIFICIAL GLY-SER-MSE-GLY PEPTIDE protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.