Sequence Similarity Clusters for the Entities in PDB 1N0W

Entity #1 | Chains: A
DNA repair protein RAD51 homolog 1 protein, length: 243 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60561
95 % 1 1 42729
90 % 1 1 40758
70 % 1 1 36069
50 % 25 38 900
40 % 25 38 928
30 % 25 40 862
Entity #2 | Chains: B
Breast cancer type 2 susceptibility protein protein, length: 35 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76385
95 % 1 1 53145
90 % 1 1 50359
70 % 1 1 44055
50 % 1 1 37553
40 % 1 1 33081
30 % 1 1 28020
Entity #3 | Chains: L
peptide linker protein, length: 14 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: C
ARTIFICIAL GLY-SER-MSE-GLY PEPTIDE protein, length: 4 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures