Sequence Similarity Clusters for the Entities in PDB 1N0L

Entity #1 | Chains: A,C
Chaperone protein PapD protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 3325
95 % 8 15 2792 Flexibility: Low
Max RMSD: 2.4, Avg RMSD: 1.0
PDBFlex
90 % 8 15 2834
70 % 8 15 2803
50 % 8 15 2765
40 % 8 15 2725
30 % 22 42 590
Entity #2 | Chains: B,D
mature Fimbrial protein PapE protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22836
95 % 2 2 19645 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 2 2 19112
70 % 2 2 17618
50 % 2 2 15305
40 % 2 2 13631
30 % 2 2 11661

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.