Sequence Similarity Clusters for the Entities in PDB 1N0L

Entity #1 | Chains: A,C
Chaperone protein PapD protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 3420
95 % 8 15 2864 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.1
PDBFlex
90 % 8 15 2904
70 % 8 15 2871
50 % 8 15 2831
40 % 8 15 2786
30 % 22 42 602
Entity #2 | Chains: B,D
mature Fimbrial protein PapE protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 23368
95 % 2 2 20063 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 2 2 19513
70 % 2 2 17987
50 % 2 2 15614
40 % 2 2 13896
30 % 2 2 11895

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures