Sequence Similarity Clusters for the Entities in PDB 1N0L

Entity #1 | Chains: A,C
Chaperone protein PapD protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 3279
95 % 8 15 2754 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.0
PDBFlex
90 % 8 15 2796
70 % 8 15 2767
50 % 8 15 2730
40 % 8 15 2687
30 % 22 42 585
Entity #2 | Chains: B,D
mature Fimbrial protein PapE protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22432
95 % 2 2 19272 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 2 2 18750
70 % 2 2 17331
50 % 2 2 15071
40 % 2 2 13423
30 % 2 2 11481

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.