Sequence Similarity Clusters for the Entities in PDB 1N0L

Entity #1 | Chains: A,C
Chaperone protein PapD protein, length: 224 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 11 3505
95 % 8 15 2932 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.1
PDBFlex
90 % 8 15 2975
70 % 8 15 2938
50 % 8 15 2893
40 % 8 15 2841
30 % 22 42 611
Entity #2 | Chains: B,D
mature Fimbrial protein PapE protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 23900
95 % 2 2 20474 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 2 2 19898
70 % 2 2 18325
50 % 2 2 15887
40 % 2 2 14127
30 % 2 2 12081

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures