Sequence Similarity Clusters for the Entities in PDB 1MZW

Entity #1 | Chains: A
U-snRNP-associated cyclophilin protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28338
95 % 2 3 23554 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 2 3 22777
70 % 2 3 20780
50 % 176 223 113
40 % 183 241 129
30 % 189 251 131
Entity #2 | Chains: B
U4/U6 snrnp 60kDa protein protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 74433
95 % 1 1 51933
90 % 1 1 49272
70 % 1 1 43142
50 % 1 1 36800
40 % 1 1 32445
30 % 1 1 27514

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.