Sequence Similarity Clusters for the Entities in PDB 1MZW

Entity #1 | Chains: A
U-snRNP-associated cyclophilin protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 29322
95 % 2 3 24339 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 2 3 23507
70 % 2 3 21414
50 % 178 225 120
40 % 185 243 137
30 % 191 253 136
Entity #2 | Chains: B
U4/U6 snrnp 60kDa protein protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 76661
95 % 1 1 53377
90 % 1 1 50575
70 % 1 1 44241
50 % 1 1 37713
40 % 1 1 33240
30 % 1 1 28179

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures