Sequence Similarity Clusters for the Entities in PDB 1MZW

Entity #1 | Chains: A
U-snRNP-associated cyclophilin protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 28966
95 % 2 3 24045 Flexibility: Low
Max RMSD: 0.6, Avg RMSD: 0.6
PDBFlex
90 % 2 3 23228
70 % 2 3 21173
50 % 176 223 117
40 % 183 241 135
30 % 189 251 135
Entity #2 | Chains: B
U4/U6 snrnp 60kDa protein protein, length: 31 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 75813
95 % 1 1 52797
90 % 1 1 50045
70 % 1 1 43788
50 % 1 1 37330
40 % 1 1 32898
30 % 1 1 27886

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures