Sequence Similarity Clusters for the Entities in PDB 1MZP

Entity #1 | Chains: B
fragment of 23S rRNA rna, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
50s ribosomal protein L1P protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 8510
95 % 1 6 6571
90 % 1 6 6558
70 % 1 6 6385
50 % 1 6 5942
40 % 1 6 5550
30 % 18 189 205

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.