Sequence Similarity Clusters for the Entities in PDB 1MZP

Entity #1 | Chains: B
fragment of 23S rRNA rna, length: 55 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
50s ribosomal protein L1P protein, length: 217 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 4 9296
95 % 1 6 7218
90 % 1 6 7193
70 % 1 6 6990
50 % 1 6 6467
40 % 1 6 6038
30 % 18 202 209

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures